- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | loxAfr1-186 | Loxodonta africana | hsa-miR-29a | 22/22 | scaffold_32707 | - | 49-70 | N/A | 0.981312 | Ortholog | 28/46 | 4/165 |
2 | loxAfr1-449 | Loxodonta africana | hsa-miR-29b | 23/23 | scaffold_9776 | + | 49-71 | N/A | 0.951188 | Ortholog | 28/46 | 4/165 |
3 | loxAfr1-189 | Loxodonta africana | hsa-miR-29b | 23/23 | scaffold_32707 | - | 49-71 | N/A | 0.997023 | Ortholog | 28/46 | 4/165 |
4 | loxAfr1-186 | Loxodonta africana | gga-miR-29a | 20/21 | scaffold_32707 | - | 50-70 | N/A | 0.972326 | Ortholog | 28/46 | 4/165 |
5 | loxAfr1-449 | Loxodonta africana | dre-miR-29b | 22/22 | scaffold_9776 | + | 51-72 | N/A | 0.99344 | Ortholog | 28/46 | 4/165 |
6 | loxAfr1-189 | Loxodonta africana | dre-miR-29b | 22/22 | scaffold_32707 | - | 49-70 | N/A | 0.996263 | Ortholog | 28/46 | 4/165 |
7 | loxAfr1-186 | Loxodonta africana | ggo-miR-29a | 22/22 | scaffold_32707 | - | 49-70 | N/A | 0.957294 | Ortholog | 28/46 | 4/165 |
8 | loxAfr1-186 | Loxodonta africana | bta-miR-29a | 23/23 | scaffold_32707 | - | 49-71 | N/A | 0.966875 | Ortholog | 28/46 | 4/165 |
9 | loxAfr1-186 | Loxodonta africana | bfl-miR-29a | 21/23 | scaffold_32707 | - | 49-71 | N/A | 0.987035 | Ortholog | 28/46 | 4/165 |
10 | loxAfr1-449 | Loxodonta africana | cap-miR-29a | 20/22 | scaffold_9776 | + | 52-71 | N/A | 0.997836 | Ortholog | 28/46 | 4/165 |
11 | loxAfr1-189 | Loxodonta africana | cap-miR-29a | 20/22 | scaffold_32707 | - | 50-69 | N/A | 0.997627 | Ortholog | 28/46 | 4/165 |
12 | loxAfr1-449 | Loxodonta africana | cap-miR-29b | 21/21 | scaffold_9776 | + | 51-71 | N/A | 0.994027 | Ortholog | 28/46 | 4/165 |
13 | loxAfr1-189 | Loxodonta africana | cap-miR-29b | 21/21 | scaffold_32707 | - | 50-70 | N/A | 0.996703 | Ortholog | 28/46 | 4/165 |
14 | loxAfr1-186 | Loxodonta africana | hsa-miR-29a* | 22/22 | scaffold_32707 | - | 11-32 | N/A | 0.97165 | Ortholog | 28/46 | 4/165 |
15 | loxAfr1-189 | Loxodonta africana | hsa-miR-29b-1* | 24/24 | scaffold_32707 | - | 12-35 | N/A | 0.997136 | Ortholog | 28/46 | 4/165 |
16 | loxAfr1-449 | Loxodonta africana | hsa-miR-29b-2* | 22/22 | scaffold_9776 | + | 10-31 | N/A | 0.842095 | Ortholog | 28/46 | 4/165 |
17 | loxAfr1-189 | Loxodonta africana | mmu-miR-29b* | 22/22 | scaffold_32707 | - | 11-32 | N/A | 0.996225 | Ortholog | 28/46 | 4/165 |
18 | loxAfr1-452 | Loxodonta africana | mmu-miR-29c* | 22/22 | scaffold_9776 | + | 13-34 | N/A | 0.929125 | Ortholog | 28/46 | 4/165 |
19 | loxAfr1-189 | Loxodonta africana | rno-miR-29b-1* | 22/22 | scaffold_32707 | - | 19-40 | N/A | 0.99915 | Ortholog | 28/46 | 4/165 |
20 | loxAfr1-189 | Loxodonta africana | oan-miR-29b* | 22/22 | scaffold_32707 | - | 13-34 | N/A | 0.99728 | Ortholog | 28/46 | 4/165 |
21 | loxAfr1-452 | Loxodonta africana | oan-miR-29a-2* | 20/21 | scaffold_9776 | + | 13-33 | N/A | 0.955567 | Ortholog | 28/46 | 4/165 |
Total | 21 record(s). |