- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cavPor3-537 | Cavia porcellus | mmu-miR-297a | 22/22 | scaffold_40 | - | 21-42 | 13971536-13971625 | 0.933598 | Ortholog | 5/47 | 39/705 |
2 | cavPor3-236 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_15 | + | 35-55 | 2001214-2001316 | 0.807318 | Ortholog | 5/47 | 39/705 |
3 | cavPor3-343 | Cavia porcellus | mmu-miR-297a | 21/22 | scaffold_21 | + | 51-72 | 12272685-12272785 | 0.977184 | Ortholog | 5/47 | 39/705 |
4 | cavPor3-227 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_14 | - | 24-44 | 18671773-18671866 | 0.943053 | Ortholog | 5/47 | 39/705 |
5 | cavPor3-48 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_100 | + | 51-71 | 5065434-5065522 | 0.981136 | Ortholog | 5/47 | 39/705 |
6 | cavPor3-687 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_66 | + | 31-51 | 3393528-3393626 | 0.965544 | Ortholog | 5/47 | 39/705 |
7 | cavPor3-670 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_60 | - | 38-59 | 9576378-9576474 | 0.830203 | Ortholog | 5/47 | 39/705 |
8 | cavPor3-640 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_52 | - | 15-35 | 10297849-10297933 | 0.994134 | Ortholog | 5/47 | 39/705 |
9 | cavPor3-506 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_38 | - | 25-45 | 2823875-2823969 | 0.992871 | Ortholog | 5/47 | 39/705 |
10 | cavPor3-444 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_31 | + | 30-50 | 2559095-2559193 | 0.93872 | Ortholog | 5/47 | 39/705 |
11 | cavPor3-382 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_25 | + | 31-52 | 1374910-1375009 | 0.984804 | Ortholog | 5/47 | 39/705 |
12 | cavPor3-390 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_25 | - | 13-34 | 3235238-3235315 | 0.992556 | Ortholog | 5/47 | 39/705 |
13 | cavPor3-384 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_25 | + | 50-71 | 8871185-8871284 | 0.987929 | Ortholog | 5/47 | 39/705 |
14 | cavPor3-394 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_25 | - | 49-70 | 12911585-12911691 | 0.90676 | Ortholog | 5/47 | 39/705 |
15 | cavPor3-368 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_23 | + | 50-71 | 27413505-27413609 | 0.828422 | Ortholog | 5/47 | 39/705 |
16 | cavPor3-298 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_19 | - | 43-63 | 28658710-28658796 | 0.837571 | Ortholog | 5/47 | 39/705 |
17 | cavPor3-288 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_19 | + | 16-37 | 323171-323255 | 0.962333 | Ortholog | 5/47 | 39/705 |
18 | cavPor3-744 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_8 | - | 49-70 | 37230880-37230974 | 0.894089 | Ortholog | 5/47 | 39/705 |
19 | cavPor3-57 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_107 | + | 9-30 | 866912-866987 | 0.971205 | Ortholog | 5/47 | 39/705 |
20 | cavPor3-50 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_102 | - | 36-57 | 1969387-1969457 | 0.954114 | Ortholog | 5/47 | 39/705 |
21 | cavPor3-497 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_35 | - | 26-47 | 21802285-21802381 | 0.978238 | Ortholog | 5/47 | 39/705 |
22 | cavPor3-165 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_12 | + | 49-70 | 18193461-18193551 | 0.999075 | Ortholog | 5/47 | 39/705 |
23 | cavPor3-773 | Cavia porcellus | mmu-miR-297a | 20/22 | scaffold_9 | - | 49-70 | 25107387-25107485 | 0.916348 | Ortholog | 5/47 | 39/705 |
24 | cavPor3-231 | Cavia porcellus | rno-miR-297 | 21/23 | scaffold_14 | - | 33-54 | 41489325-41489426 | 0.946271 | Ortholog | 5/47 | 39/705 |
25 | cavPor3-322 | Cavia porcellus | rno-miR-297 | 21/23 | scaffold_2 | + | 19-41 | 77791845-77791933 | 0.987206 | Ortholog | 5/47 | 39/705 |
26 | cavPor3-722 | Cavia porcellus | rno-miR-297 | 21/23 | scaffold_79 | + | 23-45 | 5275599-5275691 | 0.904766 | Ortholog | 5/47 | 39/705 |
27 | cavPor3-496 | Cavia porcellus | rno-miR-297 | 21/23 | scaffold_35 | + | 50-72 | 21600067-21600151 | 0.856268 | Ortholog | 5/47 | 39/705 |
28 | cavPor3-385 | Cavia porcellus | rno-miR-297 | 21/23 | scaffold_25 | + | 20-42 | 10100019-10100108 | 0.841977 | Ortholog | 5/47 | 39/705 |
29 | cavPor3-290 | Cavia porcellus | rno-miR-297 | 21/23 | scaffold_19 | + | 42-64 | 15599040-15599126 | 0.926785 | Ortholog | 5/47 | 39/705 |
30 | cavPor3-537 | Cavia porcellus | hsa-miR-297 | 21/21 | scaffold_40 | - | 21-41 | 13971536-13971625 | 0.938832 | Ortholog | 5/47 | 39/705 |
31 | cavPor3-236 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_15 | + | 35-54 | 2001214-2001316 | 0.809533 | Ortholog | 5/47 | 39/705 |
32 | cavPor3-228 | Cavia porcellus | hsa-miR-297 | 20/21 | scaffold_14 | - | 25-44 | 39576138-39576232 | 0.98176 | Ortholog | 5/47 | 39/705 |
33 | cavPor3-227 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_14 | - | 24-43 | 18671773-18671866 | 0.924743 | Ortholog | 5/47 | 39/705 |
34 | cavPor3-506 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_38 | - | 25-44 | 2823875-2823969 | 0.99432 | Ortholog | 5/47 | 39/705 |
35 | cavPor3-343 | Cavia porcellus | hsa-miR-297 | 20/21 | scaffold_21 | + | 51-71 | 12272685-12272785 | 0.967528 | Ortholog | 5/47 | 39/705 |
36 | cavPor3-657 | Cavia porcellus | hsa-miR-297 | 20/21 | scaffold_6 | + | 13-33 | 4670771-4670849 | 0.989937 | Ortholog | 5/47 | 39/705 |
37 | cavPor3-287 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_187 | + | 34-53 | 920496-920596 | 0.981957 | Ortholog | 5/47 | 39/705 |
38 | cavPor3-48 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_100 | + | 52-71 | 5065433-5065522 | 0.935437 | Ortholog | 5/47 | 39/705 |
39 | cavPor3-687 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_66 | + | 31-50 | 3393528-3393626 | 0.958557 | Ortholog | 5/47 | 39/705 |
40 | cavPor3-640 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_52 | - | 16-35 | 10297849-10297933 | 0.994753 | Ortholog | 5/47 | 39/705 |
41 | cavPor3-444 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_31 | + | 28-47 | 2559097-2559192 | 0.94295 | Ortholog | 5/47 | 39/705 |
42 | cavPor3-395 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_25 | - | 49-68 | 20266943-20267035 | 0.966437 | Ortholog | 5/47 | 39/705 |
43 | cavPor3-29 | Cavia porcellus | hsa-miR-297 | 19/21 | scaffold_10 | + | 37-56 | 31795318-31795422 | 0.891816 | Ortholog | 5/47 | 39/705 |
44 | cavPor3-537 | Cavia porcellus | mml-miR-297 | 20/20 | scaffold_40 | - | 21-40 | 13971536-13971625 | 0.97306 | Ortholog | 5/47 | 39/705 |
45 | cavPor3-56 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_105 | + | 22-40 | 3124693-3124779 | 0.992063 | Ortholog | 5/47 | 39/705 |
46 | cavPor3-228 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_14 | - | 24-42 | 39576139-39576231 | 0.993103 | Ortholog | 5/47 | 39/705 |
47 | cavPor3-336 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_2 | - | 19-37 | 71463221-71463305 | 0.934184 | Ortholog | 5/47 | 39/705 |
48 | cavPor3-343 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_21 | + | 51-70 | 12272685-12272785 | 0.974655 | Ortholog | 5/47 | 39/705 |
49 | cavPor3-27 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_10 | + | 22-41 | 21035651-21035739 | 0.906773 | Ortholog | 5/47 | 39/705 |
50 | cavPor3-694 | Cavia porcellus | mml-miR-297 | 18/20 | scaffold_7 | + | 53-70 | 44240894-44240984 | 0.984457 | Ortholog | 5/47 | 39/705 |
51 | cavPor3-657 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_6 | + | 13-32 | 4670771-4670849 | 0.992329 | Ortholog | 5/47 | 39/705 |
52 | cavPor3-610 | Cavia porcellus | mml-miR-297 | 19/20 | scaffold_5 | + | 51-70 | 14102838-14102927 | 0.996089 | Ortholog | 5/47 | 39/705 |
Total | 52 record(s). |