- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cavPor3-630 | Cavia porcellus | mmu-miR-30b | 22/22 | scaffold_51 | + | 15-36 | 2026494-2026577 | 0.996783 | Ortholog | 21/38 | 6/186 |
2 | cavPor3-283 | Cavia porcellus | hsa-miR-30c | 23/23 | scaffold_180 | + | 15-37 | 170960-171044 | 0.986442 | Ortholog | 21/38 | 6/186 |
3 | cavPor3-526 | Cavia porcellus | hsa-miR-30c | 23/23 | scaffold_4 | + | 15-37 | 54621121-54621205 | 0.96518 | Ortholog | 21/38 | 6/186 |
4 | cavPor3-281 | Cavia porcellus | mmu-miR-30e | 22/22 | scaffold_180 | + | 9-30 | 168132-168209 | 0.999843 | Ortholog | 21/38 | 6/186 |
5 | cavPor3-283 | Cavia porcellus | gga-miR-30c | 24/24 | scaffold_180 | + | 15-38 | 170960-171044 | 0.990382 | Ortholog | 21/38 | 6/186 |
6 | cavPor3-526 | Cavia porcellus | gga-miR-30c | 24/24 | scaffold_4 | + | 15-38 | 54621121-54621205 | 0.975753 | Ortholog | 21/38 | 6/186 |
7 | cavPor3-281 | Cavia porcellus | gga-miR-30e | 19/19 | scaffold_180 | + | 8-26 | 168133-168208 | 0.999742 | Ortholog | 21/38 | 6/186 |
8 | cavPor3-523 | Cavia porcellus | dre-miR-30a | 20/22 | scaffold_4 | + | 10-31 | 54598653-54598730 | 0.999607 | Ortholog | 21/38 | 6/186 |
9 | cavPor3-526 | Cavia porcellus | dre-miR-30c | 22/22 | scaffold_4 | + | 14-35 | 54621122-54621204 | 0.977466 | Ortholog | 21/38 | 6/186 |
10 | cavPor3-630 | Cavia porcellus | mml-miR-30b | 21/21 | scaffold_51 | + | 15-35 | 2026494-2026577 | 0.995132 | Ortholog | 21/38 | 6/186 |
11 | cavPor3-523 | Cavia porcellus | xtr-miR-30a-3p | 21/22 | scaffold_4 | + | 51-72 | 54598652-54598732 | 0.999796 | Ortholog | 21/38 | 6/186 |
12 | cavPor3-523 | Cavia porcellus | bta-miR-30a-5p | 24/24 | scaffold_4 | + | 12-35 | 54598651-54598732 | 0.999768 | Ortholog | 21/38 | 6/186 |
13 | cavPor3-281 | Cavia porcellus | bta-miR-30a-5p | 23/24 | scaffold_180 | + | 9-32 | 168132-168209 | 0.99986 | Ortholog | 21/38 | 6/186 |
14 | cavPor3-523 | Cavia porcellus | oan-miR-30a | 23/23 | scaffold_4 | + | 12-34 | 54598651-54598732 | 0.999531 | Ortholog | 21/38 | 6/186 |
15 | cavPor3-281 | Cavia porcellus | oan-miR-30e | 23/23 | scaffold_180 | + | 9-31 | 168132-168209 | 0.999769 | Ortholog | 21/38 | 6/186 |
16 | cavPor3-281 | Cavia porcellus | cfa-miR-30e | 22/22 | scaffold_180 | + | 51-72 | 168132-168209 | 0.999826 | Ortholog | 21/38 | 6/186 |
17 | cavPor3-629 | Cavia porcellus | hsa-miR-30d* | 22/22 | scaffold_51 | + | 51-72 | 2020352-2020431 | 0.999151 | Ortholog | 21/38 | 6/186 |
Total | 17 record(s). |