- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | danRer5-92 | Danio rerio | hsa-miR-30c | 23/23 | chr19 | + | 16-38 | 38897455-38897540 | 0.999783 | Paralog | 21/38 | 7/186 |
2 | danRer5-90 | Danio rerio | dre-miR-30e | 22/22 | chr19 | + | 7-28 | 38895545-38895620 | 0.998844 | Paralog | 21/38 | 7/186 |
3 | danRer5-92 | Danio rerio | gga-miR-30c | 24/24 | chr19 | + | 16-39 | 38897455-38897540 | 0.999863 | Paralog | 21/38 | 7/186 |
4 | danRer5-90 | Danio rerio | gga-miR-30e | 19/19 | chr19 | + | 7-25 | 38895544-38895619 | 0.999075 | Paralog | 21/38 | 7/186 |
5 | danRer5-92 | Danio rerio | dre-miR-30c | 22/22 | chr19 | + | 15-36 | 38897456-38897539 | 0.99986 | Paralog | 21/38 | 7/186 |
6 | danRer5-90 | Danio rerio | xtr-miR-30a-3p | 21/22 | chr19 | + | 51-72 | 38895545-38895620 | 0.996627 | Paralog | 21/38 | 7/186 |
7 | danRer5-90 | Danio rerio | bta-miR-30a-5p | 23/24 | chr19 | + | 8-31 | 38895544-38895621 | 0.999376 | Paralog | 21/38 | 7/186 |
8 | danRer5-90 | Danio rerio | oan-miR-30e | 23/23 | chr19 | + | 8-30 | 38895544-38895621 | 0.998967 | Paralog | 21/38 | 7/186 |
9 | dre-mir-30a | Danio rerio | dre-miR-30a | 22/22 | Zv7_NA4696 | - | 14-35 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
10 | dre-mir-30b | Danio rerio | dre-miR-30b | 22/22 | chr16 | + | 16-37 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
11 | dre-mir-30c | Danio rerio | dre-miR-30c | 22/22 | chr13 | - | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
12 | dre-mir-30d | Danio rerio | dre-miR-30d | 22/22 | chr16 | + | 35-56 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
13 | dre-mir-30e-2 | Danio rerio | dre-miR-30e | 22/22 | chr13 | - | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
14 | dre-mir-30e-2 | Danio rerio | dre-miR-30e* | 22/22 | chr13 | - | 51-72 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
Total | 14 record(s). |