- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | loxAfr1-372 | Loxodonta africana | mmu-miR-302a | 22/23 | scaffold_71007 | - | 49-71 | N/A | 0.999956 | Ortholog | 10/25 | 6/92 |
2 | loxAfr1-441 | Loxodonta africana | mmu-miR-302a | 22/23 | scaffold_9676 | - | 49-71 | N/A | 0.999956 | Ortholog | 10/25 | 6/92 |
3 | loxAfr1-376 | Loxodonta africana | hsa-miR-302c | 23/23 | scaffold_71007 | - | 49-71 | N/A | 0.999362 | Ortholog | 10/25 | 6/92 |
4 | loxAfr1-445 | Loxodonta africana | hsa-miR-302c | 23/23 | scaffold_9676 | - | 49-71 | N/A | 0.999362 | Ortholog | 10/25 | 6/92 |
5 | loxAfr1-372 | Loxodonta africana | gga-miR-302a | 22/22 | scaffold_71007 | - | 49-70 | N/A | 0.999919 | Ortholog | 10/25 | 6/92 |
6 | loxAfr1-376 | Loxodonta africana | gga-miR-302a | 20/22 | scaffold_71007 | - | 50-70 | N/A | 0.999477 | Ortholog | 10/25 | 6/92 |
7 | loxAfr1-441 | Loxodonta africana | gga-miR-302a | 22/22 | scaffold_9676 | - | 49-70 | N/A | 0.999919 | Ortholog | 10/25 | 6/92 |
8 | loxAfr1-445 | Loxodonta africana | gga-miR-302a | 20/22 | scaffold_9676 | - | 50-70 | N/A | 0.999477 | Ortholog | 10/25 | 6/92 |
9 | loxAfr1-376 | Loxodonta africana | mmu-miR-302c | 22/22 | scaffold_71007 | - | 49-70 | N/A | 0.997759 | Ortholog | 10/25 | 6/92 |
10 | loxAfr1-445 | Loxodonta africana | mmu-miR-302c | 22/22 | scaffold_9676 | - | 49-70 | N/A | 0.997759 | Ortholog | 10/25 | 6/92 |
11 | loxAfr1-372 | Loxodonta africana | mdo-miR-302a | 20/20 | scaffold_71007 | - | 50-69 | N/A | 0.999968 | Ortholog | 10/25 | 6/92 |
12 | loxAfr1-441 | Loxodonta africana | mdo-miR-302a | 20/20 | scaffold_9676 | - | 50-69 | N/A | 0.999968 | Ortholog | 10/25 | 6/92 |
13 | loxAfr1-372 | Loxodonta africana | oan-miR-302 | 21/21 | scaffold_71007 | - | 50-70 | N/A | 0.99996 | Ortholog | 10/25 | 6/92 |
14 | loxAfr1-376 | Loxodonta africana | oan-miR-302 | 20/21 | scaffold_71007 | - | 50-70 | N/A | 0.999805 | Ortholog | 10/25 | 6/92 |
15 | loxAfr1-379 | Loxodonta africana | oan-miR-302 | 20/21 | scaffold_71007 | - | 50-70 | N/A | 0.965538 | Ortholog | 10/25 | 6/92 |
16 | loxAfr1-441 | Loxodonta africana | oan-miR-302 | 21/21 | scaffold_9676 | - | 50-70 | N/A | 0.99996 | Ortholog | 10/25 | 6/92 |
17 | loxAfr1-445 | Loxodonta africana | oan-miR-302 | 20/21 | scaffold_9676 | - | 50-70 | N/A | 0.999805 | Ortholog | 10/25 | 6/92 |
18 | loxAfr1-448 | Loxodonta africana | oan-miR-302 | 20/21 | scaffold_9676 | - | 50-70 | N/A | 0.965538 | Ortholog | 10/25 | 6/92 |
19 | loxAfr1-372 | Loxodonta africana | cfa-miR-302a | 23/23 | scaffold_71007 | - | 13-35 | N/A | 0.999978 | Ortholog | 10/25 | 6/92 |
20 | loxAfr1-441 | Loxodonta africana | cfa-miR-302a | 23/23 | scaffold_9676 | - | 13-35 | N/A | 0.999978 | Ortholog | 10/25 | 6/92 |
21 | loxAfr1-376 | Loxodonta africana | cfa-miR-302c | 22/22 | scaffold_71007 | - | 21-42 | N/A | 0.998605 | Ortholog | 10/25 | 6/92 |
22 | loxAfr1-445 | Loxodonta africana | cfa-miR-302c | 22/22 | scaffold_9676 | - | 21-42 | N/A | 0.998605 | Ortholog | 10/25 | 6/92 |
23 | loxAfr1-372 | Loxodonta africana | mmu-miR-302a* | 21/22 | scaffold_71007 | - | 13-34 | N/A | 0.999973 | Ortholog | 10/25 | 6/92 |
24 | loxAfr1-441 | Loxodonta africana | mmu-miR-302a* | 21/22 | scaffold_9676 | - | 13-34 | N/A | 0.999973 | Ortholog | 10/25 | 6/92 |
Total | 24 record(s). |