- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-351 | Callithrix jacchus | mmu-miR-34c | 23/23 | Contig2863 | - | 20-42 | 275027-275116 | 0.99532 | Ortholog | 45/67 | 4/144 |
2 | calJac1-353 | Callithrix jacchus | mmu-miR-34b-3p | 22/22 | Contig2863 | - | 49-70 | 275522-275601 | 0.995695 | Ortholog | 45/67 | 4/144 |
3 | calJac1-353 | Callithrix jacchus | hsa-miR-34b | 22/22 | Contig2863 | - | 49-70 | 275521-275602 | 0.994436 | Ortholog | 45/67 | 4/144 |
4 | calJac1-351 | Callithrix jacchus | hsa-miR-34c-3p | 22/22 | Contig2863 | - | 48-69 | 275031-275111 | 0.953606 | Ortholog | 45/67 | 4/144 |
5 | calJac1-560 | Callithrix jacchus | dps-miR-34 | 20/22 | Contig56291 | - | 33-53 | 2490-2583 | 0.927194 | Ortholog | 45/67 | 4/144 |
6 | calJac1-351 | Callithrix jacchus | bta-miR-34c | 22/22 | Contig2863 | - | 20-41 | 275027-275116 | 0.99666 | Ortholog | 45/67 | 4/144 |
7 | calJac1-351 | Callithrix jacchus | spu-miR-34 | 20/22 | Contig2863 | - | 21-41 | 275027-275116 | 0.993105 | Ortholog | 45/67 | 4/144 |
8 | calJac1-114 | Callithrix jacchus | hsa-miR-34a* | 22/22 | Contig154 | - | 49-70 | 878141-878214 | 0.994208 | Ortholog | 45/67 | 4/144 |
9 | calJac1-353 | Callithrix jacchus | hsa-miR-34b* | 23/23 | Contig2863 | - | 13-35 | 275520-275603 | 0.994555 | Ortholog | 45/67 | 4/144 |
Total | 9 record(s). |