- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cavPor3-681 | Cavia porcellus | cel-miR-34 | 20/22 | scaffold_65 | + | 51-72 | 1910372-1910470 | 0.977161 | Ortholog | 45/67 | 5/144 |
2 | cavPor3-387 | Cavia porcellus | hsa-miR-34a | 22/22 | scaffold_25 | + | 50-71 | 24334305-24334396 | 0.909133 | Ortholog | 45/67 | 5/144 |
3 | cavPor3-301 | Cavia porcellus | mmu-miR-34b-5p | 23/23 | scaffold_19 | - | 14-36 | 36239753-36239836 | 0.996762 | Ortholog | 45/67 | 5/144 |
4 | cavPor3-301 | Cavia porcellus | hsa-miR-34b | 22/22 | scaffold_19 | - | 49-70 | 36239754-36239835 | 0.992442 | Ortholog | 45/67 | 5/144 |
5 | cavPor3-301 | Cavia porcellus | rno-miR-34b | 23/23 | scaffold_19 | - | 13-35 | 36239753-36239836 | 0.994847 | Ortholog | 45/67 | 5/144 |
6 | cavPor3-387 | Cavia porcellus | gga-miR-34a | 23/23 | scaffold_25 | + | 49-71 | 24334306-24334398 | 0.955048 | Ortholog | 45/67 | 5/144 |
7 | cavPor3-408 | Cavia porcellus | dps-miR-34 | 20/22 | scaffold_27 | - | 33-54 | 11895308-11895411 | 0.911109 | Ortholog | 45/67 | 5/144 |
8 | cavPor3-301 | Cavia porcellus | bta-miR-34b | 22/22 | scaffold_19 | - | 14-35 | 36239753-36239836 | 0.995332 | Ortholog | 45/67 | 5/144 |
9 | cavPor3-300 | Cavia porcellus | oan-miR-34* | 20/22 | scaffold_19 | - | 49-70 | 36239318-36239400 | 0.980394 | Ortholog | 45/67 | 5/144 |
Total | 9 record(s). |