- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-106 | Anolis carolinensis | dre-miR-499 | 22/22 | scaffold_17 | + | 14-35 | 4619039-4619121 | 0.999448 | Ortholog | 11/30 | 1/32 |
2 | anoCar1-106 | Anolis carolinensis | oan-miR-499* | 20/22 | scaffold_17 | + | 51-72 | 4619040-4619123 | 0.999238 | Ortholog | 11/30 | 1/32 |
3 | bta-mir-499 | Bos taurus | bta-miR-499 | 21/21 | chr13 | + | 14-34 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
4 | cfa-mir-499 | Canis familiaris | cfa-miR-499 | 21/21 | chr24 | + | 1-21 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
5 | cavPor3-592 | Cavia porcellus | oan-miR-499* | 21/22 | scaffold_45 | + | 51-72 | 1799345-1799427 | 0.999652 | Ortholog | 11/30 | 1/32 |
6 | cavPor3-592 | Cavia porcellus | oan-miR-499 | 20/21 | scaffold_45 | + | 14-34 | 1799345-1799427 | 0.99994 | Ortholog | 11/30 | 1/32 |
7 | cavPor3-592 | Cavia porcellus | xtr-miR-499 | 22/23 | scaffold_45 | + | 14-35 | 1799345-1799427 | 0.999954 | Ortholog | 11/30 | 1/32 |
8 | danRer5-222 | Danio rerio | dre-miR-499 | 22/22 | chr23 | + | 12-33 | 16586875-16586955 | 0.999983 | Paralog | 11/30 | 2/32 |
9 | danRer5-222 | Danio rerio | oan-miR-499 | 20/21 | chr23 | + | 12-32 | 16586875-16586955 | 0.999978 | Paralog | 11/30 | 2/32 |
10 | danRer5-222 | Danio rerio | xtr-miR-499 | 23/23 | chr23 | + | 13-35 | 16586874-16586956 | 0.99998 | Paralog | 11/30 | 2/32 |
11 | dre-mir-499 | Danio rerio | dre-miR-499 | 22/22 | chr11 | - | 17-38 | N/A | - | miRBase_13_0 | 11/30 | 2/32 |
12 | dasNov1-199 | Dasypus novemcinctus | oan-miR-499* | 21/22 | scaffold_3367 | + | 51-72 | N/A | 0.999832 | Ortholog | 11/30 | 1/32 |
13 | dasNov1-199 | Dasypus novemcinctus | oan-miR-499 | 20/21 | scaffold_3367 | + | 14-34 | N/A | 0.999971 | Ortholog | 11/30 | 1/32 |
14 | dasNov1-199 | Dasypus novemcinctus | xtr-miR-499 | 22/23 | scaffold_3367 | + | 14-35 | N/A | 0.999977 | Ortholog | 11/30 | 1/32 |
15 | echTel1-6 | Echinops telfari | oan-miR-499* | 21/22 | scaffold_114829 | - | 49-70 | N/A | 0.991517 | Ortholog | 11/30 | 1/32 |
16 | echTel1-6 | Echinops telfari | xtr-miR-499 | 22/23 | scaffold_114829 | - | 15-36 | N/A | 0.99994 | Ortholog | 11/30 | 1/32 |
17 | echTel1-6 | Echinops telfari | oan-miR-499 | 20/21 | scaffold_114829 | - | 15-35 | N/A | 0.999921 | Ortholog | 11/30 | 1/32 |
18 | equCab1-279 | Equus caballus | oan-miR-499* | 21/22 | chr22 | + | 51-72 | 25844619-25844701 | 0.999652 | Ortholog | 11/30 | 1/32 |
19 | equCab1-279 | Equus caballus | xtr-miR-499 | 22/23 | chr22 | + | 14-35 | 25844619-25844701 | 0.999954 | Ortholog | 11/30 | 1/32 |
20 | equCab1-279 | Equus caballus | oan-miR-499 | 20/21 | chr22 | + | 14-34 | 25844619-25844701 | 0.99994 | Ortholog | 11/30 | 1/32 |
21 | eriEur1-109 | Erinaceus europaeus | oan-miR-499 | 20/21 | scaffold_312335 | + | 14-34 | N/A | 0.99994 | Ortholog | 11/30 | 1/32 |
22 | eriEur1-109 | Erinaceus europaeus | xtr-miR-499 | 22/23 | scaffold_312335 | + | 14-35 | N/A | 0.999954 | Ortholog | 11/30 | 1/32 |
23 | eriEur1-109 | Erinaceus europaeus | oan-miR-499* | 21/22 | scaffold_312335 | + | 51-72 | N/A | 0.999652 | Ortholog | 11/30 | 1/32 |
24 | felCat3-187 | Felis catus | xtr-miR-499 | 22/23 | scaffold_164323 | + | 15-36 | 97763-97846 | 0.999983 | Ortholog | 11/30 | 1/32 |
25 | felCat3-187 | Felis catus | oan-miR-499 | 20/21 | scaffold_164323 | + | 15-35 | 97763-97846 | 0.999977 | Ortholog | 11/30 | 1/32 |
26 | felCat3-187 | Felis catus | oan-miR-499* | 21/22 | scaffold_164323 | + | 51-72 | 97763-97846 | 0.999903 | Ortholog | 11/30 | 1/32 |
27 | fr2-257 | Fugu rubripes | oan-miR-499* | 20/22 | chrUn | - | 49-70 | 151289910-151289986 | 0.99973 | Ortholog | 11/30 | 1/32 |
28 | fr2-257 | Fugu rubripes | dre-miR-499 | 22/22 | chrUn | - | 18-39 | 151289905-151289993 | 0.999909 | Ortholog | 11/30 | 1/32 |
29 | fr2-257 | Fugu rubripes | xtr-miR-499 | 23/23 | chrUn | - | 18-40 | 151289905-151289993 | 0.99988 | Ortholog | 11/30 | 1/32 |
30 | fr2-257 | Fugu rubripes | oan-miR-499 | 20/21 | chrUn | - | 14-34 | 151289907-151289989 | 0.999877 | Ortholog | 11/30 | 1/32 |
31 | gga-mir-499 | Gallus gallus | gga-miR-499 | 23/23 | chr20 | - | 17-39 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
32 | gasAcu1-279 | Gasterosteus aculeatus | hsa-miR-499-3p | 20/22 | chrUn | - | 49-70 | 3644021-3644108 | 0.82647 | Ortholog | 11/30 | 2/32 |
33 | gasAcu1-634 | Gasterosteus aculeatus | xtr-miR-499 | 23/23 | chrXVII | - | 14-36 | 10484742-10484824 | 0.999874 | Ortholog | 11/30 | 2/32 |
34 | gasAcu1-634 | Gasterosteus aculeatus | oan-miR-499* | 20/22 | chrXVII | - | 49-70 | 10484741-10484821 | 0.999447 | Ortholog | 11/30 | 2/32 |
35 | gasAcu1-634 | Gasterosteus aculeatus | dre-miR-499 | 22/22 | chrXVII | - | 14-35 | 10484742-10484824 | 0.999903 | Ortholog | 11/30 | 2/32 |
36 | gasAcu1-634 | Gasterosteus aculeatus | oan-miR-499 | 20/21 | chrXVII | - | 14-34 | 10484742-10484824 | 0.999877 | Ortholog | 11/30 | 2/32 |
37 | hsa-mir-499 | Homo sapiens | hsa-miR-499-3p | 22/22 | chr20 | + | 70-91 | 33041840-33041961 | - | miRBase_13_0 | 11/30 | 1/32 |
38 | hsa-mir-499 | Homo sapiens | hsa-miR-499-5p | 21/21 | chr20 | + | 33-53 | 33041840-33041961 | - | miRBase_13_0 | 11/30 | 1/32 |
39 | loxAfr1-106 | Loxodonta africana | xtr-miR-499 | 22/23 | scaffold_18804 | + | 14-35 | N/A | 0.999954 | Ortholog | 11/30 | 1/32 |
40 | loxAfr1-106 | Loxodonta africana | oan-miR-499* | 21/22 | scaffold_18804 | + | 51-72 | N/A | 0.999652 | Ortholog | 11/30 | 1/32 |
41 | loxAfr1-106 | Loxodonta africana | oan-miR-499 | 20/21 | scaffold_18804 | + | 14-34 | N/A | 0.99994 | Ortholog | 11/30 | 1/32 |
42 | mml-mir-499 | Macaca mulatta | mml-miR-499-3p | 22/22 | chr10 | - | 69-90 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
43 | mml-mir-499 | Macaca mulatta | mml-miR-499-5p | 21/21 | chr10 | - | 32-52 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
44 | monDom4-14 | Monodelphis domestica | oan-miR-499 | 20/21 | chr1 | + | 14-34 | 388424206-388424288 | 0.999701 | Ortholog | 11/30 | 1/32 |
45 | monDom4-14 | Monodelphis domestica | xtr-miR-499 | 22/23 | chr1 | + | 14-35 | 388424206-388424288 | 0.999743 | Ortholog | 11/30 | 1/32 |
46 | mmu-mir-499 | Mus musculus | mmu-miR-499 | 21/21 | chr2 | + | 14-34 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
47 | oan-mir-499 | Ornithorhynchus anatinus | oan-miR-499 | 21/21 | Contig212181 | + | 19-39 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
48 | oan-mir-499 | Ornithorhynchus anatinus | oan-miR-499* | 22/22 | Contig212181 | + | 56-77 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
49 | oryCun1-395 | Oryctolagus cuniculus | xtr-miR-499 | 22/23 | scaffold_207338 | - | 14-35 | N/A | 0.999942 | Ortholog | 11/30 | 1/32 |
50 | oryCun1-395 | Oryctolagus cuniculus | oan-miR-499* | 21/22 | scaffold_207338 | - | 49-70 | N/A | 0.999328 | Ortholog | 11/30 | 1/32 |
51 | oryCun1-395 | Oryctolagus cuniculus | oan-miR-499 | 20/21 | scaffold_207338 | - | 14-34 | N/A | 0.999926 | Ortholog | 11/30 | 1/32 |
52 | oryLat2-314 | Oryzias latipes | oan-miR-499* | 20/22 | chr5 | - | 49-70 | 26842788-26842867 | 0.99935 | Ortholog | 11/30 | 1/32 |
53 | oryLat2-314 | Oryzias latipes | xtr-miR-499 | 23/23 | chr5 | - | 18-40 | 26842786-26842874 | 0.999255 | Ortholog | 11/30 | 1/32 |
54 | oryLat2-314 | Oryzias latipes | oan-miR-499 | 20/21 | chr5 | - | 14-34 | 26842787-26842870 | 0.999304 | Ortholog | 11/30 | 1/32 |
55 | oryLat2-314 | Oryzias latipes | dre-miR-499 | 22/22 | chr5 | - | 18-39 | 26842786-26842874 | 0.999428 | Ortholog | 11/30 | 1/32 |
56 | otoGar1-1 | Otolemur garnettii | oan-miR-499* | 21/22 | scaffold_100661.1-176800 | + | 50-71 | N/A | 0.999726 | Ortholog | 11/30 | 1/32 |
57 | otoGar1-1 | Otolemur garnettii | oan-miR-499 | 20/21 | scaffold_100661.1-176800 | + | 14-34 | N/A | 0.999979 | Ortholog | 11/30 | 1/32 |
58 | otoGar1-1 | Otolemur garnettii | xtr-miR-499 | 22/23 | scaffold_100661.1-176800 | + | 14-35 | N/A | 0.999983 | Ortholog | 11/30 | 1/32 |
59 | ptr-mir-499 | Pan troglodytes | ptr-miR-499 | 22/22 | chr20 | + | 69-90 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
60 | ponAbe2-485 | Pongo abelii | oan-miR-499* | 21/22 | chr20 | + | 51-72 | 32202585-32202667 | 0.999652 | Ortholog | 11/30 | 1/32 |
61 | ponAbe2-485 | Pongo abelii | oan-miR-499 | 20/21 | chr20 | + | 14-34 | 32202585-32202667 | 0.99994 | Ortholog | 11/30 | 1/32 |
62 | ponAbe2-485 | Pongo abelii | xtr-miR-499 | 22/23 | chr20 | + | 14-35 | 32202585-32202667 | 0.999954 | Ortholog | 11/30 | 1/32 |
63 | rno-mir-499 | Rattus norvegicus | rno-miR-499 | 21/21 | chr3 | + | 5-25 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
64 | sorAra1-254 | Sorex araneus | oan-miR-499* | 21/22 | scaffold_81013 | - | 49-70 | N/A | 0.999811 | Ortholog | 11/30 | 1/32 |
65 | sorAra1-254 | Sorex araneus | xtr-miR-499 | 22/23 | scaffold_81013 | - | 19-40 | N/A | 0.999985 | Ortholog | 11/30 | 1/32 |
66 | sorAra1-254 | Sorex araneus | oan-miR-499 | 20/21 | scaffold_81013 | - | 14-34 | N/A | 0.99998 | Ortholog | 11/30 | 1/32 |
67 | taeGut1-180 | Taeniopygia guttata | xtr-miR-499 | 22/23 | chr20 | - | 14-36 | 3206367-3206451 | 0.999642 | Ortholog | 11/30 | 1/32 |
68 | taeGut1-180 | Taeniopygia guttata | oan-miR-499* | 20/22 | chr20 | - | 49-70 | 3206371-3206448 | 0.997966 | Ortholog | 11/30 | 1/32 |
69 | taeGut1-180 | Taeniopygia guttata | dre-miR-499 | 21/22 | chr20 | - | 14-35 | 3206367-3206451 | 0.999669 | Ortholog | 11/30 | 1/32 |
70 | taeGut1-180 | Taeniopygia guttata | oan-miR-499 | 21/21 | chr20 | - | 14-34 | 3206368-3206451 | 0.999625 | Ortholog | 11/30 | 1/32 |
71 | tetNig1-29 | Tetraodon nigroviridis | dre-miR-499 | 22/22 | chr11 | - | 18-39 | 9176472-9176560 | 0.999909 | Ortholog | 11/30 | 1/32 |
72 | tetNig1-29 | Tetraodon nigroviridis | xtr-miR-499 | 23/23 | chr11 | - | 18-40 | 9176472-9176560 | 0.99988 | Ortholog | 11/30 | 1/32 |
73 | tetNig1-29 | Tetraodon nigroviridis | oan-miR-499* | 20/22 | chr11 | - | 49-70 | 9176477-9176553 | 0.99973 | Ortholog | 11/30 | 1/32 |
74 | tetNig1-29 | Tetraodon nigroviridis | oan-miR-499 | 20/21 | chr11 | - | 14-34 | 9176474-9176556 | 0.999877 | Ortholog | 11/30 | 1/32 |
75 | tupBel1-1265 | Tupaia belangeri | xtr-miR-499 | 22/23 | scaffold_150471.1-65629 | + | 14-35 | N/A | 0.999972 | Ortholog | 11/30 | 1/32 |
76 | tupBel1-1265 | Tupaia belangeri | oan-miR-499* | 21/22 | scaffold_150471.1-65629 | + | 51-72 | N/A | 0.999789 | Ortholog | 11/30 | 1/32 |
77 | tupBel1-1265 | Tupaia belangeri | oan-miR-499 | 20/21 | scaffold_150471.1-65629 | + | 14-34 | N/A | 0.999963 | Ortholog | 11/30 | 1/32 |
78 | xtr-mir-499 | Xenopus tropicalis | xtr-miR-499 | 23/23 | scaffold_38 | - | 16-38 | N/A | - | miRBase_13_0 | 11/30 | 1/32 |
Total | 78 record(s). |