- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cavPor3-16 | Cavia porcellus | hsa-miR-574-5p | 23/23 | scaffold_1 | + | 29-51 | 17322146-17322241 | 0.931493 | Ortholog | 3/44 | 44/2260 |
2 | cavPor3-381 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_25 | + | 23-43 | 826231-826322 | 0.996921 | Ortholog | 3/44 | 44/2260 |
3 | cavPor3-386 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_25 | + | 49-70 | 11478998-11479107 | 0.857181 | Ortholog | 3/44 | 44/2260 |
4 | cavPor3-296 | Cavia porcellus | hsa-miR-574-5p | 22/23 | scaffold_19 | - | 40-62 | 19146251-19146358 | 0.872002 | Ortholog | 3/44 | 44/2260 |
5 | cavPor3-240 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_15 | - | 44-65 | 18041579-18041688 | 0.892685 | Ortholog | 3/44 | 44/2260 |
6 | cavPor3-531 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_4 | - | 50-70 | 18325475-18325561 | 0.938474 | Ortholog | 3/44 | 44/2260 |
7 | cavPor3-528 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_4 | - | 26-48 | 843911-844006 | 0.903495 | Ortholog | 3/44 | 44/2260 |
8 | cavPor3-284 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_186 | - | 49-70 | 168457-168553 | 0.965745 | Ortholog | 3/44 | 44/2260 |
9 | cavPor3-635 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_52 | - | 29-50 | 7338213-7338309 | 0.911382 | Ortholog | 3/44 | 44/2260 |
10 | cavPor3-633 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_52 | + | 50-72 | 6619230-6619324 | 0.964877 | Ortholog | 3/44 | 44/2260 |
11 | cavPor3-635 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_52 | - | 24-46 | 7338214-7338308 | 0.96819 | Ortholog | 3/44 | 44/2260 |
12 | cavPor3-602 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_47 | - | 39-60 | 4050416-4050525 | 0.827079 | Ortholog | 3/44 | 44/2260 |
13 | cavPor3-447 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_31 | + | 50-72 | 17745571-17745657 | 0.944391 | Ortholog | 3/44 | 44/2260 |
14 | cavPor3-370 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_23 | - | 47-69 | 13540661-13540756 | 0.963749 | Ortholog | 3/44 | 44/2260 |
15 | cavPor3-367 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_23 | + | 28-50 | 20181279-20181376 | 0.985723 | Ortholog | 3/44 | 44/2260 |
16 | cavPor3-342 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_20 | - | 15-37 | 29805444-29805528 | 0.90857 | Ortholog | 3/44 | 44/2260 |
17 | cavPor3-267 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_17 | - | 9-31 | 467378-467452 | 0.966615 | Ortholog | 3/44 | 44/2260 |
18 | cavPor3-268 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_17 | - | 12-34 | 6929677-6929759 | 0.855273 | Ortholog | 3/44 | 44/2260 |
19 | cavPor3-204 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_13 | + | 51-72 | 45752582-45752668 | 0.9753 | Ortholog | 3/44 | 44/2260 |
20 | cavPor3-729 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_8 | - | 49-71 | 9612936-9613033 | 0.984988 | Ortholog | 3/44 | 44/2260 |
21 | cavPor3-626 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_5 | - | 48-69 | 49230950-49231057 | 0.819881 | Ortholog | 3/44 | 44/2260 |
22 | cavPor3-2 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_0 | + | 40-62 | 32380950-32381053 | 0.852505 | Ortholog | 3/44 | 44/2260 |
23 | cavPor3-628 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_509 | - | 23-45 | 117108-117201 | 0.989457 | Ortholog | 3/44 | 44/2260 |
24 | cavPor3-472 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_327 | - | 49-71 | 306197-306291 | 0.913927 | Ortholog | 3/44 | 44/2260 |
25 | cavPor3-176 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_120 | + | 17-39 | 3042200-3042279 | 0.970832 | Ortholog | 3/44 | 44/2260 |
26 | cavPor3-785 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_93 | + | 50-72 | 1417019-1417109 | 0.966321 | Ortholog | 3/44 | 44/2260 |
27 | cavPor3-782 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_91 | + | 47-69 | 3913213-3913301 | 0.938715 | Ortholog | 3/44 | 44/2260 |
28 | cavPor3-762 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_88 | - | 19-41 | 5569323-5569395 | 0.967016 | Ortholog | 3/44 | 44/2260 |
29 | cavPor3-755 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_84 | + | 50-72 | 6068577-6068658 | 0.982804 | Ortholog | 3/44 | 44/2260 |
30 | cavPor3-700 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_70 | - | 39-61 | 2629068-2629139 | 0.913387 | Ortholog | 3/44 | 44/2260 |
31 | cavPor3-671 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_61 | + | 36-58 | 9164190-9164295 | 0.979241 | Ortholog | 3/44 | 44/2260 |
32 | cavPor3-669 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_60 | + | 50-72 | 7597912-7598001 | 0.951625 | Ortholog | 3/44 | 44/2260 |
33 | cavPor3-654 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_55 | - | 49-71 | 2379535-2379638 | 0.944483 | Ortholog | 3/44 | 44/2260 |
34 | cavPor3-596 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_45 | - | 48-70 | 10395302-10395402 | 0.832385 | Ortholog | 3/44 | 44/2260 |
35 | cavPor3-534 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_40 | + | 27-49 | 896997-897092 | 0.937649 | Ortholog | 3/44 | 44/2260 |
36 | cavPor3-512 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_39 | + | 39-61 | 14424351-14424431 | 0.929264 | Ortholog | 3/44 | 44/2260 |
37 | cavPor3-505 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_38 | + | 7-29 | 9320976-9321051 | 0.994418 | Ortholog | 3/44 | 44/2260 |
38 | cavPor3-495 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_35 | + | 50-72 | 19494715-19494812 | 0.981376 | Ortholog | 3/44 | 44/2260 |
39 | cavPor3-481 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_33 | - | 48-70 | 14507600-14507695 | 0.949396 | Ortholog | 3/44 | 44/2260 |
40 | cavPor3-416 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_28 | - | 49-71 | 17733139-17733238 | 0.817351 | Ortholog | 3/44 | 44/2260 |
41 | cavPor3-397 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_26 | - | 48-70 | 26725215-26725297 | 0.964577 | Ortholog | 3/44 | 44/2260 |
42 | cavPor3-62 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_11 | + | 50-72 | 2191560-2191666 | 0.964083 | Ortholog | 3/44 | 44/2260 |
43 | cavPor3-67 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_11 | - | 23-45 | 17847896-17847989 | 0.977856 | Ortholog | 3/44 | 44/2260 |
44 | cavPor3-76 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_11 | - | 19-41 | 50189488-50189576 | 0.905099 | Ortholog | 3/44 | 44/2260 |
45 | cavPor3-422 | Cavia porcellus | hsa-miR-574-5p | 21/23 | scaffold_3 | + | 50-72 | 3124976-3125047 | 0.810206 | Ortholog | 3/44 | 44/2260 |
Total | 45 record(s). |