- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | tetNig1-154 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chr5 | + | 14-36 | 5059364-5059447 | 0.999874 | Paralog | 41/59 | 7/206 |
2 | tetNig1-305 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chrUn_random | - | 14-36 | 41305758-41305842 | 0.999623 | Paralog | 41/59 | 7/206 |
3 | tetNig1-341 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chrUn_random | - | 17-39 | 167063039-167063126 | 0.999899 | Paralog | 41/59 | 7/206 |
4 | tetNig1-154 | Tetraodon nigroviridis | xtr-miR-9 | 22/22 | chr5 | + | 12-33 | 5059366-5059446 | 0.999772 | Paralog | 41/59 | 7/206 |
5 | tetNig1-305 | Tetraodon nigroviridis | xtr-miR-9 | 22/22 | chrUn_random | - | 14-35 | 41305758-41305842 | 0.999291 | Paralog | 41/59 | 7/206 |
6 | tetNig1-341 | Tetraodon nigroviridis | xtr-miR-9 | 22/22 | chrUn_random | - | 17-38 | 167063039-167063126 | 0.999794 | Paralog | 41/59 | 7/206 |
7 | tetNig1-154 | Tetraodon nigroviridis | sko-miR-9 | 21/21 | chr5 | + | 12-32 | 5059366-5059446 | 0.99977 | Paralog | 41/59 | 7/206 |
8 | tetNig1-305 | Tetraodon nigroviridis | sko-miR-9 | 21/21 | chrUn_random | - | 13-33 | 41305759-41305841 | 0.99936 | Paralog | 41/59 | 7/206 |
9 | tetNig1-341 | Tetraodon nigroviridis | sko-miR-9 | 21/21 | chrUn_random | - | 15-35 | 167063041-167063124 | 0.999793 | Paralog | 41/59 | 7/206 |
10 | tetNig1-154 | Tetraodon nigroviridis | mmu-miR-9* | 22/22 | chr5 | + | 51-72 | 5059366-5059447 | 0.999765 | Paralog | 41/59 | 7/206 |
11 | tetNig1-305 | Tetraodon nigroviridis | mmu-miR-9* | 22/22 | chrUn_random | - | 49-70 | 41305761-41305838 | 0.999215 | Paralog | 41/59 | 7/206 |
12 | tetNig1-341 | Tetraodon nigroviridis | mmu-miR-9* | 21/22 | chrUn_random | - | 49-70 | 167063041-167063124 | 0.999682 | Paralog | 41/59 | 7/206 |
13 | tetNig1-341 | Tetraodon nigroviridis | gga-miR-9* | 20/21 | chrUn_random | - | 50-70 | 167063041-167063124 | 0.999743 | Paralog | 41/59 | 7/206 |
14 | tetNig1-305 | Tetraodon nigroviridis | gga-miR-9* | 19/21 | chrUn_random | - | 50-70 | 41305761-41305838 | 0.999395 | Paralog | 41/59 | 7/206 |
15 | tetNig1-154 | Tetraodon nigroviridis | gga-miR-9* | 19/21 | chr5 | + | 50-70 | 5059368-5059445 | 0.999751 | Paralog | 41/59 | 7/206 |
16 | tni-mir-9-1 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chr21_random | + | 19-41 | N/A | - | miRBase_13_0 | 41/59 | 7/206 |
17 | tni-mir-9-3 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chr13 | + | 16-38 | N/A | - | miRBase_13_0 | 41/59 | 7/206 |
18 | tni-mir-9-4 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chrUn_random | + | 14-36 | N/A | - | miRBase_13_0 | 41/59 | 7/206 |
19 | tni-mir-9-2 | Tetraodon nigroviridis | tni-miR-9 | 23/23 | chr12 | + | 8-30 | N/A | - | miRBase_13_0 | 41/59 | 7/206 |
Total | 19 record(s). |