- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-127 | Anolis carolinensis | bta-miR-27a | 20/20 | scaffold_2 | - | 50-69 | 12610873-12610948 | 0.999555 | Ortholog | 22/38 | 2/81 |
2 | anoCar1-127 | Anolis carolinensis | dre-miR-27a | 22/22 | scaffold_2 | - | 49-70 | 12610874-12610947 | 0.998492 | Ortholog | 22/38 | 2/81 |
3 | anoCar1-94 | Anolis carolinensis | dre-miR-27b | 22/22 | scaffold_140 | - | 49-70 | 2521765-2521837 | 0.999417 | Ortholog | 22/38 | 2/81 |
4 | anoCar1-94 | Anolis carolinensis | bta-miR-27a | 18/20 | scaffold_140 | - | 51-68 | 2521763-2521839 | 0.999649 | Ortholog | 22/38 | 2/81 |
5 | anoCar1-94 | Anolis carolinensis | mmu-miR-27b* | 22/22 | scaffold_140 | - | 14-35 | 2521760-2521844 | 0.999221 | Ortholog | 22/38 | 2/81 |
6 | calJac1-406 | Callithrix jacchus | hsa-miR-27a* | 22/22 | Contig3607 | - | 13-34 | 243619-243702 | 0.996512 | Ortholog | 22/38 | 2/81 |
7 | calJac1-406 | Callithrix jacchus | ggo-miR-27a | 21/22 | Contig3607 | - | 49-70 | 243624-243697 | 0.994282 | Ortholog | 22/38 | 2/81 |
8 | calJac1-406 | Callithrix jacchus | dre-miR-27a | 20/22 | Contig3607 | - | 50-70 | 243623-243698 | 0.996583 | Ortholog | 22/38 | 2/81 |
9 | calJac1-546 | Callithrix jacchus | mmu-miR-27b* | 22/22 | Contig539 | + | 9-30 | 208702-208777 | 0.999077 | Ortholog | 22/38 | 2/81 |
10 | calJac1-546 | Callithrix jacchus | ggo-miR-27a | 20/22 | Contig539 | + | 51-71 | 208702-208777 | 0.999249 | Ortholog | 22/38 | 2/81 |
11 | calJac1-546 | Callithrix jacchus | dre-miR-27b | 22/22 | Contig539 | + | 51-72 | 208702-208777 | 0.99945 | Ortholog | 22/38 | 2/81 |
12 | cavPor3-550 | Cavia porcellus | hsa-miR-27a* | 22/22 | scaffold_42 | + | 12-33 | 12931837-12931917 | 0.999563 | Ortholog | 22/38 | 2/81 |
13 | cavPor3-550 | Cavia porcellus | bta-miR-27a | 20/20 | scaffold_42 | + | 52-71 | 12931837-12931917 | 0.999894 | Ortholog | 22/38 | 2/81 |
14 | cavPor3-558 | Cavia porcellus | mmu-miR-27b* | 22/22 | scaffold_42 | - | 14-35 | 4055564-4055648 | 0.999514 | Ortholog | 22/38 | 2/81 |
15 | dasNov1-107 | Dasypus novemcinctus | mmu-miR-27b* | 22/22 | scaffold_20018 | - | 14-35 | N/A | 0.999186 | Ortholog | 22/38 | 1/81 |
16 | dasNov1-107 | Dasypus novemcinctus | dre-miR-27b | 22/22 | scaffold_20018 | - | 49-70 | N/A | 0.999509 | Ortholog | 22/38 | 1/81 |
17 | dasNov1-107 | Dasypus novemcinctus | ggo-miR-27a | 20/22 | scaffold_20018 | - | 49-69 | N/A | 0.999183 | Ortholog | 22/38 | 1/81 |
18 | echTel1-363 | Echinops telfari | ggo-miR-27a | 20/22 | scaffold_321881 | + | 51-71 | N/A | 0.999249 | Ortholog | 22/38 | 1/81 |
19 | echTel1-363 | Echinops telfari | dre-miR-27b | 22/22 | scaffold_321881 | + | 51-72 | N/A | 0.99945 | Ortholog | 22/38 | 1/81 |
20 | echTel1-363 | Echinops telfari | mmu-miR-27b* | 22/22 | scaffold_321881 | + | 9-30 | N/A | 0.999077 | Ortholog | 22/38 | 1/81 |
21 | equCab1-647 | Equus caballus | hsa-miR-27a* | 22/22 | chrUn | + | 11-32 | 199158058-199158137 | 0.999692 | Ortholog | 22/38 | 2/81 |
22 | equCab1-647 | Equus caballus | dre-miR-27a | 21/22 | chrUn | + | 51-71 | 199158059-199158136 | 0.999819 | Ortholog | 22/38 | 2/81 |
23 | equCab1-647 | Equus caballus | bta-miR-27a | 20/20 | chrUn | + | 52-71 | 199158058-199158137 | 0.999956 | Ortholog | 22/38 | 2/81 |
24 | equCab1-647 | Equus caballus | ggo-miR-27a | 22/22 | chrUn | + | 51-72 | 199158059-199158136 | 0.999374 | Ortholog | 22/38 | 2/81 |
25 | equCab1-697 | Equus caballus | mmu-miR-27b* | 22/22 | chrUn | - | 14-35 | 118877241-118877325 | 0.99913 | Ortholog | 22/38 | 2/81 |
26 | equCab1-697 | Equus caballus | bta-miR-27a | 18/20 | chrUn | - | 51-68 | 118877245-118877320 | 0.999631 | Ortholog | 22/38 | 2/81 |
27 | equCab1-697 | Equus caballus | ggo-miR-27a | 20/22 | chrUn | - | 49-69 | 118877246-118877318 | 0.999084 | Ortholog | 22/38 | 2/81 |
28 | equCab1-697 | Equus caballus | dre-miR-27b | 22/22 | chrUn | - | 48-69 | 118877245-118877317 | 0.998498 | Ortholog | 22/38 | 2/81 |
29 | eriEur1-310 | Erinaceus europaeus | mmu-miR-27b* | 22/22 | scaffold_375683 | - | 14-35 | N/A | 0.999315 | Ortholog | 22/38 | 2/81 |
30 | eriEur1-310 | Erinaceus europaeus | dre-miR-27b | 22/22 | scaffold_375683 | - | 49-70 | N/A | 0.99945 | Ortholog | 22/38 | 2/81 |
31 | eriEur1-310 | Erinaceus europaeus | ggo-miR-27a | 20/22 | scaffold_375683 | - | 49-69 | N/A | 0.999084 | Ortholog | 22/38 | 2/81 |
32 | eriEur1-86 | Erinaceus europaeus | bta-miR-27a | 20/20 | scaffold_290670 | - | 42-61 | N/A | 0.995453 | Ortholog | 22/38 | 2/81 |
33 | felCat3-288 | Felis catus | dre-miR-27b | 22/22 | scaffold_200810 | + | 51-72 | 432656-432731 | 0.999463 | Ortholog | 22/38 | 1/81 |
34 | felCat3-288 | Felis catus | ggo-miR-27a | 20/22 | scaffold_200810 | + | 51-71 | 432656-432731 | 0.999267 | Ortholog | 22/38 | 1/81 |
35 | felCat3-288 | Felis catus | mmu-miR-27b* | 22/22 | scaffold_200810 | + | 9-30 | 432656-432731 | 0.999097 | Ortholog | 22/38 | 1/81 |
36 | gasAcu1-387 | Gasterosteus aculeatus | bta-miR-27a | 18/20 | chrVIII | - | 50-67 | 13314010-13314083 | 0.99645 | Ortholog | 22/38 | 5/81 |
37 | gasAcu1-387 | Gasterosteus aculeatus | dre-miR-27e | 22/22 | chrVIII | - | 49-70 | 13314011-13314082 | 0.992959 | Ortholog | 22/38 | 5/81 |
38 | gasAcu1-444 | Gasterosteus aculeatus | ggo-miR-27a | 20/22 | chrXI | - | 49-70 | 11680845-11680920 | 0.999895 | Ortholog | 22/38 | 5/81 |
39 | gasAcu1-444 | Gasterosteus aculeatus | dre-miR-27c | 21/21 | chrXI | - | 49-69 | 11680845-11680920 | 0.999941 | Ortholog | 22/38 | 5/81 |
40 | gasAcu1-512 | Gasterosteus aculeatus | bta-miR-27a | 18/20 | chrXIII | - | 51-68 | 6044730-6044807 | 0.998177 | Ortholog | 22/38 | 5/81 |
41 | gasAcu1-512 | Gasterosteus aculeatus | mmu-miR-27b* | 22/22 | chrXIII | - | 14-35 | 6044728-6044812 | 0.993024 | Ortholog | 22/38 | 5/81 |
42 | gasAcu1-69 | Gasterosteus aculeatus | dre-miR-27e | 22/22 | chrIII | + | 49-70 | 12319342-12319414 | 0.984515 | Ortholog | 22/38 | 5/81 |
43 | gasAcu1-69 | Gasterosteus aculeatus | bta-miR-27a | 18/20 | chrIII | + | 53-70 | 12319338-12319420 | 0.994859 | Ortholog | 22/38 | 5/81 |
44 | gasAcu1-75 | Gasterosteus aculeatus | bta-miR-27a | 20/20 | chrIII | + | 51-70 | 13373317-13373394 | 0.999554 | Ortholog | 22/38 | 5/81 |
45 | gasAcu1-75 | Gasterosteus aculeatus | ggo-miR-27a | 21/22 | chrIII | + | 51-71 | 13373317-13373394 | 0.999047 | Ortholog | 22/38 | 5/81 |
46 | gasAcu1-75 | Gasterosteus aculeatus | dre-miR-27a | 22/22 | chrIII | + | 51-72 | 13373317-13373394 | 0.999519 | Ortholog | 22/38 | 5/81 |
47 | loxAfr1-195 | Loxodonta africana | mmu-miR-27b* | 22/22 | scaffold_32929 | - | 14-35 | N/A | 0.999241 | Ortholog | 22/38 | 2/81 |
48 | loxAfr1-345 | Loxodonta africana | hsa-miR-27a* | 22/22 | scaffold_65688 | - | 13-34 | N/A | 0.996033 | Ortholog | 22/38 | 2/81 |
49 | loxAfr1-345 | Loxodonta africana | bta-miR-27a | 20/20 | scaffold_65688 | - | 50-69 | N/A | 0.998419 | Ortholog | 22/38 | 2/81 |
50 | loxAfr1-345 | Loxodonta africana | ggo-miR-27a | 22/22 | scaffold_65688 | - | 49-70 | N/A | 0.99421 | Ortholog | 22/38 | 2/81 |
51 | loxAfr1-345 | Loxodonta africana | dre-miR-27a | 21/22 | scaffold_65688 | - | 50-70 | N/A | 0.99674 | Ortholog | 22/38 | 2/81 |
52 | oryLat2-183 | Oryzias latipes | dre-miR-27a | 22/22 | chr17 | - | 49-70 | 29779209-29779281 | 0.998162 | Ortholog | 22/38 | 5/81 |
53 | oryLat2-183 | Oryzias latipes | xtr-miR-27c | 19/21 | chr17 | - | 51-69 | 29779209-29779283 | 0.998326 | Ortholog | 22/38 | 5/81 |
54 | oryLat2-183 | Oryzias latipes | bta-miR-27a | 20/20 | chr17 | - | 50-69 | 29779208-29779282 | 0.998648 | Ortholog | 22/38 | 5/81 |
55 | oryLat2-183 | Oryzias latipes | ggo-miR-27a | 21/22 | chr17 | - | 50-70 | 29779208-29779282 | 0.997366 | Ortholog | 22/38 | 5/81 |
56 | oryLat2-188 | Oryzias latipes | bta-miR-27a | 18/20 | chr17 | - | 51-68 | 31554037-31554113 | 0.995029 | Ortholog | 22/38 | 5/81 |
57 | oryLat2-188 | Oryzias latipes | dre-miR-27e | 21/22 | chr17 | - | 50-70 | 31554038-31554112 | 0.99338 | Ortholog | 22/38 | 5/81 |
58 | oryLat2-398 | Oryzias latipes | ggo-miR-27a | 20/22 | chr8 | - | 49-70 | 13688190-13688265 | 0.999914 | Ortholog | 22/38 | 5/81 |
59 | oryLat2-398 | Oryzias latipes | dre-miR-27c | 21/21 | chr8 | - | 49-69 | 13688190-13688265 | 0.999952 | Ortholog | 22/38 | 5/81 |
60 | oryLat2-410 | Oryzias latipes | ggo-miR-27a | 20/22 | chr9 | - | 50-70 | 8313421-8313495 | 0.986043 | Ortholog | 22/38 | 5/81 |
61 | oryLat2-410 | Oryzias latipes | dre-miR-27d | 21/22 | chr9 | - | 49-70 | 8313422-8313494 | 0.989963 | Ortholog | 22/38 | 5/81 |
62 | oryLat2-410 | Oryzias latipes | bta-miR-27a | 18/20 | chr9 | - | 51-68 | 8313419-8313496 | 0.994994 | Ortholog | 22/38 | 5/81 |
63 | oryLat2-410 | Oryzias latipes | mmu-miR-27b* | 22/22 | chr9 | - | 14-35 | 8313417-8313501 | 0.969113 | Ortholog | 22/38 | 5/81 |
64 | oryLat2-68 | Oryzias latipes | dre-miR-27d | 20/22 | chr12 | - | 50-70 | 24946958-24947035 | 0.975944 | Ortholog | 22/38 | 5/81 |
65 | otoGar1-390 | Otolemur garnettii | mmu-miR-27b* | 22/22 | scaffold_85556.1-51344 | - | 14-35 | N/A | 0.999111 | Ortholog | 22/38 | 1/81 |
66 | otoGar1-390 | Otolemur garnettii | ggo-miR-27a | 20/22 | scaffold_85556.1-51344 | - | 49-69 | N/A | 0.999084 | Ortholog | 22/38 | 1/81 |
67 | otoGar1-390 | Otolemur garnettii | dre-miR-27b | 22/22 | scaffold_85556.1-51344 | - | 49-70 | N/A | 0.99945 | Ortholog | 22/38 | 1/81 |
68 | petMar1-17 | Petromyzon marinus | bta-miR-27a | 18/20 | Contig12505 | - | 51-68 | 16176-16254 | 0.995912 | Ortholog | 22/38 | 2/81 |
69 | petMar1-77 | Petromyzon marinus | bta-miR-27a | 19/20 | Contig4317 | - | 51-69 | 10325-10404 | 0.995066 | Ortholog | 22/38 | 2/81 |
70 | petMar1-77 | Petromyzon marinus | xtr-miR-27c | 21/21 | Contig4317 | - | 50-70 | 10326-10403 | 0.993658 | Ortholog | 22/38 | 2/81 |
71 | petMar1-77 | Petromyzon marinus | hsa-miR-27a* | 20/22 | Contig4317 | - | 12-33 | 10325-10407 | 0.991192 | Ortholog | 22/38 | 2/81 |
72 | ponAbe2-473 | Pongo abelii | bta-miR-27a | 20/20 | chr19_random | - | 49-68 | 5335812-5335885 | 0.998755 | Ortholog | 22/38 | 2/81 |
73 | ponAbe2-473 | Pongo abelii | dre-miR-27a | 21/22 | chr19_random | - | 49-69 | 5335812-5335885 | 0.997409 | Ortholog | 22/38 | 2/81 |
74 | ponAbe2-473 | Pongo abelii | ggo-miR-27a | 22/22 | chr19_random | - | 49-70 | 5335812-5335885 | 0.994758 | Ortholog | 22/38 | 2/81 |
75 | ponAbe2-473 | Pongo abelii | hsa-miR-27a* | 21/22 | chr19_random | - | 16-36 | 5335807-5335892 | 0.974945 | Ortholog | 22/38 | 2/81 |
76 | ponAbe2-744 | Pongo abelii | dre-miR-27b | 22/22 | chr9 | + | 51-72 | 91048821-91048896 | 0.99945 | Ortholog | 22/38 | 2/81 |
77 | ponAbe2-744 | Pongo abelii | mmu-miR-27b* | 22/22 | chr9 | + | 9-30 | 91048821-91048896 | 0.999077 | Ortholog | 22/38 | 2/81 |
78 | ponAbe2-744 | Pongo abelii | ggo-miR-27a | 20/22 | chr9 | + | 51-71 | 91048821-91048896 | 0.999249 | Ortholog | 22/38 | 2/81 |
79 | sorAra1-63 | Sorex araneus | ggo-miR-27a | 20/22 | scaffold_204072 | - | 49-69 | N/A | 0.999664 | Ortholog | 22/38 | 1/81 |
80 | sorAra1-63 | Sorex araneus | dre-miR-27b | 22/22 | scaffold_204072 | - | 49-70 | N/A | 0.999801 | Ortholog | 22/38 | 1/81 |
81 | tupBel1-540 | Tupaia belangeri | hsa-miR-27a* | 22/22 | scaffold_14228.1-91866 | - | 13-34 | N/A | 0.997131 | Ortholog | 22/38 | 2/81 |
82 | tupBel1-99 | Tupaia belangeri | ggo-miR-27a | 20/22 | scaffold_115258.1-293732 | - | 49-69 | N/A | 0.999084 | Ortholog | 22/38 | 2/81 |
83 | tupBel1-99 | Tupaia belangeri | dre-miR-27b | 22/22 | scaffold_115258.1-293732 | - | 49-70 | N/A | 0.99945 | Ortholog | 22/38 | 2/81 |
84 | tupBel1-99 | Tupaia belangeri | mmu-miR-27b* | 22/22 | scaffold_115258.1-293732 | - | 14-35 | N/A | 0.999111 | Ortholog | 22/38 | 2/81 |
Total | 84 record(s). |