- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | csa-let-7a | let-7 | csa-let-7a | 22/22 | reftig_41 | + | 16-37 | N/A | - | miRBase_13_0 | 44/65 | 5/337 |
2 | csa-let-7b | let-7 | csa-let-7b | 22/22 | reftig_41 | + | 16-37 | N/A | - | miRBase_13_0 | 44/65 | 5/337 |
3 | csa-let-7c-1 | let-7 | csa-let-7c | 22/22 | reftig_41 | + | 16-37 | N/A | - | miRBase_13_0 | 44/65 | 5/337 |
4 | csa-let-7c-2 | let-7 | csa-let-7c | 22/22 | reftig_41 | + | 16-37 | N/A | - | miRBase_13_0 | 44/65 | 5/337 |
5 | csa-let-7d | let-7 | csa-let-7d | 22/22 | reftig_44 | + | 16-37 | N/A | - | miRBase_13_0 | 44/65 | 5/337 |
6 | csa-mir-124-1 | mir-124 | csa-miR-124 | 22/22 | reftig_262 | + | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
7 | csa-mir-124-2 | mir-124 | csa-miR-124 | 22/22 | reftig_262 | + | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
8 | csa-mir-126 | mir-126 | csa-miR-126 | 21/21 | reftig_27 | - | 66-86 | N/A | - | miRBase_13_0 | 15/22 | 1/23 |
9 | csa-mir-133 | mir-133 | csa-miR-133 | 21/21 | reftig_62 | - | 66-86 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
10 | csa-mir-141 | mir-141 | csa-miR-141 | 22/22 | reftig_613 | + | 48-69 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
11 | csa-mir-1473 | mir-1473 | csa-miR-1473 | 22/22 | reftig_44 | + | 66-87 | N/A | - | miRBase_13_0 | 3/3 | 1/3 |
12 | csa-mir-1497 | mir-1497 | csa-miR-1497 | 23/23 | reftig_55 | - | 66-88 | N/A | - | miRBase_13_0 | 3/3 | 1/12 |
13 | csa-mir-153 | mir-153 | csa-miR-153 | 22/22 | reftig_48 | - | 66-87 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
14 | csa-mir-155 | mir-155 | csa-miR-155 | 23/23 | reftig_1 | - | 101-123 | N/A | - | miRBase_13_0 | 12/30 | 1/33 |
15 | csa-mir-183 | mir-183 | csa-miR-183 | 23/23 | reftig_48 | - | 16-38 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
16 | csa-mir-200 | mir-200 | csa-miR-200 | 22/22 | reftig_613 | + | 44-65 | N/A | - | miRBase_13_0 | 21/37 | 1/88 |
17 | csa-mir-216a | mir-216 | csa-miR-216a | 23/23 | reftig_16 | + | 16-38 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
18 | csa-mir-216b | mir-216 | csa-miR-216b | 22/22 | reftig_16 | + | 16-37 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
19 | csa-mir-217 | mir-217 | csa-miR-217 | 22/22 | reftig_16 | + | 16-37 | N/A | - | miRBase_13_0 | 20/37 | 1/47 |
20 | csa-mir-219 | mir-219 | csa-miR-219 | 21/21 | reftig_67 | + | 16-36 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
21 | csa-mir-281 | mir-281 | csa-miR-281 | 23/23 | reftig_67 | + | 66-88 | N/A | - | miRBase_13_0 | 25/33 | 1/68 |
22 | csa-mir-31 | mir-31 | csa-miR-31 | 21/21 | reftig_48 | - | 16-36 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
23 | csa-mir-34 | mir-34 | csa-miR-34 | 22/22 | reftig_0 | + | 16-37 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
24 | csa-mir-7 | mir-7 | csa-miR-7 | 23/23 | reftig_30 | + | 16-38 | N/A | - | miRBase_13_0 | 46/63 | 1/143 |
25 | csa-mir-92a | mir-92 | csa-miR-92a | 21/21 | reftig_1 | + | 66-86 | N/A | - | miRBase_13_0 | 47/65 | 3/170 |
26 | csa-mir-92b | mir-92 | csa-miR-92b | 21/21 | reftig_1 | + | 66-86 | N/A | - | miRBase_13_0 | 47/65 | 3/170 |
27 | csa-mir-92c | mir-92 | csa-miR-92c | 22/22 | reftig_1 | + | 57-78 | N/A | - | miRBase_13_0 | 47/65 | 3/170 |
Total | 27 record(s). |